UniProt MCP Server

Example Use Cases

• 1

  Search the UniProt protein database using complex query syntax.

• 2

  Fetch specific protein entries by accession IDs with customizable fields.

• 3

  Paginated, structured protein data responses in JSON or TOON format.

Description

This MCP server enables querying and fetching protein data from the UniProt databases (UniProtKB, UniParc, UniRef) using standard UniProt query syntax. It supports pagination, field selection, and returns data in JSON or TOON formats. The server facilitates easy integration with MCP clients and is useful for retrieving curated protein sequence and annotation data efficiently.