PubTator MCP Server

MCPOpen SourceMIT16.9

by BioMCP-Hub • Healthcare & Bioinformatics

A server for accessing PubTator3 for biomedical literature annotation and relationship mining.

Example Use Cases

1
Search and annotate biomedical literature
2
Analyze relationships between biomedical entities
3
Batch processing of large datasets of literature annotations

Description

PubTator MCP Server facilitates AI assistants with programmatic access to PubTator3, allowing them to search scientific literature, obtain annotations, and analyze biomedical entity relationships. It supports literature annotation export, entity ID lookup, and relationship mining. This server can be deployed easily via Docker and integrates with various clients through the Model Context Protocol (MCP).

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Security

Scanned 2 month(s) ago

Risk Level

MINIMAL

Read-only data retrieval, no side effects

Trust Score

D44/100

4/17 checks passed

Scores are informational only and provided “as is” without warranty. AgentHotspot assumes no liability for actions taken based on these ratings.

Quick Stats

Service TypeMCP

Pricing ModelFree

Capabilities0 Tools / 0 Prompts / 0 Resources

OwnerBioMCP-Hub

CategoryHealthcare & Bioinformatics

DependenciesStandalone