Nf-core Tools MCP

MCPOpen Source12.2

by FloWuenne • Workflow & Task Management

An experimental suite for accessing nf-core tools via either CLI or Python-based MCP servers.

Example Use Cases

1
Create pipelines using nf-core templates.
2
List and manage nf-core modules within their projects.
3
Experiment with MCP capabilities of nf-core tools through CLI or Python.

Description

The Nf-core Tools MCP provides tools to experiment with the capabilities of nf-core functions. This includes creating pipelines and modules using nf-core templates and installing modules into pipelines or module repositories. The MCP offers both command-line and Python-based server implementations to accommodate different testing and usage needs.

Quick Actions

View on GitHub

Security

Scanned 2 month(s) ago

Risk Level

MINIMAL

Read-only data retrieval, no side effects

Trust Score

D40/100

3/17 checks passed

Scores are informational only and provided “as is” without warranty. AgentHotspot assumes no liability for actions taken based on these ratings.

Quick Stats

Service TypeMCP

Pricing ModelUnknown

Capabilities0 Tools / 0 Prompts / 0 Resources

OwnerFloWuenne

CategoryWorkflow & Task Management

DependenciesStandalone