GTEx Portal MCP Server

Example Use Cases

• 1

  Query gene expression patterns across multiple human tissues.

• 2

  Analyze genetic associations such as eQTLs and sQTLs in genomic regions.

• 3

  Access detailed gene, variant, and tissue metadata from the GTEx dataset.

Description

This server offers structured access to gene expression, eQTL/sQTL association analyses, and reference datasets from the GTEx project. It enables comprehensive genomics research by integrating the GTEx Portal API with a modular MCP framework, supporting tasks like tissue-specific expression profiling, co-expression analysis, and variant annotation. The server is production-ready, fully implemented in TypeScript, and designed for seamless integration with AI assistants.